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CNET_8k_ar_decoding_N2_2e18flops_clinvar_test

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train · 1.02k rows

ref_forward_sequence string	alt_forward_sequence string	label int64	chromosome string	position int64	seq string	ref string	alt string	start int64	stop int64	chrom string	loss_weights list	input_ids list	loss list	unreduced_loss list	logits list	bpred_output list	inference_params null	ar_loss list	ratio_loss null	total_flops list
ACTGGGGTAGTGATGTGTCCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCCTTAGACAAGACACAGTGTAGGGCCCGGCCCGTGTTGGCCCCAGGACTCCTTTGGAATATAGCTGTGGACAATGAATCCTGCGAGCGATGGGGGCACATCAGAGAGCATTTTTGACCTGGACTATGCATCCTGGGGGATCCGCTCCACGCTGATGGTCGCTGGCTTTGTCTTCTACTTGGGCGTCTTTGTGGTCTGCCACCAGCTGTCCTCTTCCCTGAATGCCACTTACCGTTCTTTGGTGGCCAGAGAGAAGGTCTTCTGGGACCTGGCGGCCACGCGTGCAGTCTTTGGTGTTCAGAGCACAGCCGCAGGCCTGTGGGCTCTGCTGGGGGACCCTGTGCTGCATGCCGACAAGGCGCGTGGCCAGCAGAACTGGTGCTGGTTTCACATCACGA	ACTGGGGTAGTGATGTGTCCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCCTTAGACAAGACACAGTGTAGGGCCCGGCCCGTGTTGGCCCCAGGACTCCTTTGGAATATAGCTGTGGACAATGAATCCTGCGAGCGATGGGGGCACATCAGAGAGCATTTTTGACCTGGACTATGCATCCTGGGGGATCGGCTCCACGCTGATGGTCGCTGGCTTTGTCTTCTACTTGGGCGTCTTTGTGGTCTGCCACCAGCTGTCCTCTTCCCTGAATGCCACTTACCGTTCTTTGGTGGCCAGAGAGAAGGTCTTCTGGGACCTGGCGGCCACGCGTGCAGTCTTTGGTGTTCAGAGCACAGCCGCAGGCCTGTGGGCTCTGCTGGGGGACCCTGTGCTGCATGCCGACAAGGCGCGTGGCCAGCAGAACTGGTGCTGGTTTCACATCACGA	1	8	1,771,124	ACTGGGGTAGTGATGTGTCCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCCTTAGACAAGACACAGTGTAGGGCCCGGCCCGTGTTGGCCCCAGGACTCCTTTGGAATATAGCTGTGGACAATGAATCCTGCGAGCGATGGGGGCACATCAGAGAGCATTTTTGACCTGGACTATGCATCCTGGGGGATCCGCTCCACGCTGATGGTCGCTGGCTTTGTCTTCTACTTGGGCGTCTTTGTGGTCTGCCACCAGCTGTCCTCTTCCCTGAATGCCACTTACCGTTCTTTGGTGGCCAGAGAGAAGGTCTTCTGGGACCTGGCGGCCACGCGTGCAGTCTTTGGTGTTCAGAGCACAGCCGCAGGCCTGTGGGCTCTGCTGGGGGACCCTGTGCTGCATGCCGACAAGGCGCGTGGCCAGCAGAACTGGTGCTGGTTTCACATCACGA	C	G	1,771,124	1,771,636	8	[ 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1...	[ [ 7, 8, 10, 9, 9, 9, 9, 10, 7, 9, 10, 9, 7, 10, 9, 10, 9, 10, 8, 8, 10, 10, 9, 10, 10, 10, 8, 10, 7, 10, 8, 9, 7, 9, 10, 8, 7, 7, 8, 7, 8, 7, 7,...	[ 0.2097005844116211 ]	[ 0.000507354736328125, 0.0004673004150390625, 0.0002956390380859375, 0.00026702880859375, 0.0004787445068359375, 0.000274658203125, 0.000453948974609375, 0.000934600830078125, 0.000537872314453125, 0.00041961669921875, 0.0004825592041015625, 0.0003528594970703125, 0.0004062652587890625, 0.0...	[ [ [ -11.4375, -11.375, -12, -11.5, -11.1875, -11.3125, -11.625, 4.90625, 2.515625, 2.359375, 2.84375, -10.8125, -11.8125, -11.4375, -11.5625, -11.625 ], [ -11, -11.1875, -11.25, -11.37...	[ { "boundary_mask": [ true, true, false, false, false, true, true, true, false, false, true, false, true, true, false, true, false, true, true, false, false, false, false, ...	null	[ 0.2097005844116211 ]	null	[ 23481079808 ]
"CCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCC(...TRUNCATED)	"CCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCC(...TRUNCATED)	1	8	1,771,142	"CCTTGTTTCTATCGAGTCAACACAAAATGAATGATCTTTCTTTTAGATTGAAGATGGATACGTGACAATCCCAGGGACCGCTGCACTGACTTCATTTCC(...TRUNCATED)	G	C	1,771,142	1,771,654	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[8,8,10,10,9,10,10,10,8,10,7,10,8,9,7,9,10,8,7,7,8,7,8,7,7,7,7,10,9,7,7,10,9,7,10,8,10,10,10,8,10,1(...TRUNCATED)	[ 0.2092452049255371 ]	[0.000331878662109375,0.0003528594970703125,0.000553131103515625,0.000270843505859375,0.000408172607(...TRUNCATED)	[[[-10.75,-11.25,-11.4375,-11.25,-11.125,-11.4375,-11.1875,2.4375,5.25,2.359375,2.578125,-10.8125,-1(...TRUNCATED)	[{"boundary_mask":[true,true,false,false,false,true,true,true,true,false,false,true,false,false,true(...TRUNCATED)	null	[ 0.2092452049255371 ]	null	[ 23599132672 ]
"TCTCCATGCAGGCGGGCTGGTCCGAGTCTCTGTTTTGGAAGCTCAACCAGTGGCTGATGATTCACATGTTTCACTGCCGCATGGTTCTAACCTACCACA(...TRUNCATED)	"TCTCCATGCAGGCGGGCTGGTCCGAGTCTCTGTTTTGGAAGCTCAACCAGTGGCTGATGATTCACATGTTTCACTGCCGCATGGTTCTAACCTACCACA(...TRUNCATED)	1	8	1,780,495	"TCTCCATGCAGGCGGGCTGGTCCGAGTCTCTGTTTTGGAAGCTCAACCAGTGGCTGATGATTCACATGTTTCACTGCCGCATGGTTCTAACCTACCACA(...TRUNCATED)	G	C	1,780,495	1,781,007	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[10,8,10,8,8,7,10,9,8,7,9,9,8,9,9,9,8,10,9,9,10,8,8,9,7,9,10,8,10,8,10,9,10,10,10,10,9,9,7,7,9,8,10(...TRUNCATED)	[ 0.20504379272460938 ]	[0.00041961669921875,0.00032806396484375,0.0003566741943359375,0.00030517578125,0.000138282775878906(...TRUNCATED)	[[[-11.3125,-11.625,-11.625,-11.4375,-11.75,-11.6875,-11.625,2.5625,3.0,2.84375,5.34375,-10.8125,-11(...TRUNCATED)	[{"boundary_mask":[true,true,false,true,false,false,true,false,true,false,false,true,true,false,fals(...TRUNCATED)	null	[ 0.20504379272460938 ]	null	[ 23244996608 ]
"GGGAACATGTTTCACCATGTCCAGGAAGGGCTGTATTTTTAAGGTCTGTTTTTTCCTTTTTTCCAACAAACAAAACCAAAACAAAACCTAGCCCAGAAC(...TRUNCATED)	"GGGAACATGTTTCACCATGTCCAGGAAGGGCTGTATTTTTAAGGTCTGTTTTTTCCTTTTTTCCAACAAACAAAACCAAAACAAAACCTAGCCCAGAAC(...TRUNCATED)	1	8	1,882,669	"GGGAACATGTTTCACCATGTCCAGGAAGGGCTGTATTTTTAAGGTCTGTTTTTTCCTTTTTTCCAACAAACAAAACCAAAACAAAACCTAGCCCAGAAC(...TRUNCATED)	C	T	1,882,669	1,883,181	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[9,9,9,7,7,8,7,10,9,10,10,10,8,7,8,8,7,10,9,10,8,8,7,9,9,7,7,9,9,9,8,10,9,10,7,10,10,10,10,10,7,7,9(...TRUNCATED)	[ 0.19079220294952393 ]	[0.000339508056640625,0.0003185272216796875,0.000331878662109375,0.000278472900390625,0.000293731689(...TRUNCATED)	[[[-10.875,-10.5,-11.0,-10.8125,-10.75,-10.875,-11.1875,2.78125,1.7265625,5.1875,2.5,-10.25,-11.3125(...TRUNCATED)	[{"boundary_mask":[true,true,true,true,true,true,false,true,false,true,true,false,true,true,true,tru(...TRUNCATED)	null	[ 0.19079220294952393 ]	null	[ 24071299072 ]
"TAACACTTCAGAGGGTTTTTAGAGGGAGTAGATGTGAACTTGTGTGTATGATTCACCGTTGTAACTGGAACAGATATGTTTTAAGCAGCGTTATGCATT(...TRUNCATED)	"TAACACTTCAGAGGGTTTTTAGAGGGAGTAGATGTGAACTTGTGTGTATGATTCACCGTTGTAACTGGAACAGATATGTTTTAAGCAGCGTTATGCATT(...TRUNCATED)	1	8	6,414,797	"TAACACTTCAGAGGGTTTTTAGAGGGAGTAGATGTGAACTTGTGTGTATGATTCACCGTTGTAACTGGAACAGATATGTTTTAAGCAGCGTTATGCATT(...TRUNCATED)	C	G	6,414,797	6,415,309	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[10,7,7,8,7,8,10,10,8,7,9,7,9,9,9,10,10,10,10,10,7,9,7,9,9,9,7,9,10,7,9,7,10,9,10,9,7,7,8,10,10,9,1(...TRUNCATED)	[ 0.21227550506591797 ]	[0.0005035400390625,0.0004749298095703125,0.0003376007080078125,0.00060272216796875,0.00028800964355(...TRUNCATED)	[[[-11.5625,-11.4375,-11.875,-11.5625,-11.9375,-11.75,-11.75,3.28125,2.65625,2.59375,5.21875,-11.0,-(...TRUNCATED)	[{"boundary_mask":[true,false,false,true,false,true,false,false,true,false,false,true,false,false,fa(...TRUNCATED)	null	[ 0.21227550506591797 ]	null	[ 24484442112 ]
"AACAGATATGTTTTAAGCAGCGTTATGCATTCCTTTGAGTGTTTCTCTGTCAGATGTTGAGAAACAGAATTGCTGGGGTAGAGGTTTTTTGATCAGTTG(...TRUNCATED)	"AACAGATATGTTTTAAGCAGCGTTATGCATTCCTTTGAGTGTTTCTCTGTCAGATGTTGAGAAACAGAATTGCTGGGGTAGAGGTTTTTTGATCAGTTG(...TRUNCATED)	1	8	6,414,865	"AACAGATATGTTTTAAGCAGCGTTATGCATTCCTTTGAGTGTTTCTCTGTCAGATGTTGAGAAACAGAATTGCTGGGGTAGAGGTTTTTTGATCAGTTG(...TRUNCATED)	C	T	6,414,865	6,415,377	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[7,7,8,7,9,7,10,7,10,9,10,10,10,10,7,7,9,8,7,9,8,9,10,10,7,10,9,8,7,10,10,8,8,10,10,10,9,7,9,10,9,1(...TRUNCATED)	[ 0.21313762664794922 ]	[0.000385284423828125,0.000274658203125,0.0004100799560546875,0.0001354217529296875,0.00043296813964(...TRUNCATED)	[[[-11.125,-10.8125,-11.625,-11.0625,-11.0,-10.8125,-11.5,5.3125,2.84375,2.125,2.921875,-10.75,-11.2(...TRUNCATED)	[{"boundary_mask":[true,true,true,false,false,true,true,false,true,false,true,true,false,false,true,(...TRUNCATED)	null	[ 0.21313762664794922 ]	null	[ 24484442112 ]
"CTGAGGAGACACAGTTGGCTTGCTGACAAGTCTAGCTCCATATCATATTCTCACTTAAAACTTAGTCTAAAAAAAGTGAAAAACACATTTACCTATATC(...TRUNCATED)	"CTGAGGAGACACAGTTGGCTTGCTGACAAGTCTAGCTCCATATCATATTCTCACTTAAAACTTAGTCTAAAAAAAGTGAAAAACACATTTACCTATATC(...TRUNCATED)	1	8	6,508,958	"CTGAGGAGACACAGTTGGCTTGCTGACAAGTCTAGCTCCATATCATATTCTCACTTAAAACTTAGTCTAAAAAAAGTGAAAAACACATTTACCTATATC(...TRUNCATED)	C	G	6,508,958	6,509,470	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[8,10,9,7,9,9,7,9,7,8,7,8,7,9,10,10,9,9,8,10,10,9,8,10,9,7,8,7,7,9,10,8,10,7,9,8,10,8,8,7,10,7,10,8(...TRUNCATED)	[ 0.22020339965820312 ]	[0.000354766845703125,0.0003643035888671875,0.0004215240478515625,0.000270843505859375,0.00031280517(...TRUNCATED)	[[[-10.75,-11.0,-11.375,-11.1875,-11.1875,-11.0,-11.0,2.671875,5.25,2.34375,2.578125,-11.0,-11.0,-11(...TRUNCATED)	[{"boundary_mask":[true,false,false,true,false,true,true,false,true,true,false,true,false,false,true(...TRUNCATED)	null	[ 0.22020339965820312 ]	null	[ 24071299072 ]
"TTTCTACATCATTCATATGCAGCTTTTGTATTTTCTGCACAGCAGCGGCACTTAGAGCCCTTGGCAAGCACTCTAGGCGAGGTAGCTGCCCAGTAACTA(...TRUNCATED)	"TTTCTACATCATTCATATGCAGCTTTTGTATTTTCTGCACAGCAGCGGCACTTAGAGCCCTTGGCAAGCACTCTAGGCGAGGTAGCTGCCCAGTAACTA(...TRUNCATED)	1	8	6,519,898	"TTTCTACATCATTCATATGCAGCTTTTGTATTTTCTGCACAGCAGCGGCACTTAGAGCCCTTGGCAAGCACTCTAGGCGAGGTAGCTGCCCAGTAACTA(...TRUNCATED)	G	A	6,519,898	6,520,410	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[10,10,10,8,10,7,8,7,10,8,7,10,10,8,7,10,7,10,9,8,7,9,8,10,10,10,10,9,10,7,10,10,10,10,8,10,9,8,7,8(...TRUNCATED)	[ 0.201385498046875 ]	[0.000278472900390625,0.00034332275390625,0.0002803802490234375,0.000362396240234375,0.0003547668457(...TRUNCATED)	[[[-11.5,-11.625,-11.75,-11.5,-11.9375,-11.625,-11.8125,2.9375,2.796875,2.421875,5.71875,-11.0625,-1(...TRUNCATED)	[{"boundary_mask":[true,true,false,true,false,false,true,false,true,false,false,true,false,false,fal(...TRUNCATED)	null	[ 0.201385498046875 ]	null	[ 23717163008 ]
"GCAGAGGTAGCAGCCTCCATCTTCCAGCTGCTCCAGGGCGCTGAGGCTATGCAGGCCCCGGGGTGTGGTGACAGAGCGCACCCCAAAGGAGAGAGGCAC(...TRUNCATED)	"GCAGAGGTAGCAGCCTCCATCTTCCAGCTGCTCCAGGGCGCTGAGGCTATGCAGGCCCCGGGGTGTGGTGACAGAGCGCACCCCAAAGGAGAGAGGCAC(...TRUNCATED)	1	8	10,623,146	"GCAGAGGTAGCAGCCTCCATCTTCCAGCTGCTCCAGGGCGCTGAGGCTATGCAGGCCCCGGGGTGTGGTGACAGAGCGCACCCCAAAGGAGAGAGGCAC(...TRUNCATED)	G	T	10,623,146	10,623,658	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[9,8,7,9,7,9,9,10,7,9,8,7,9,8,8,10,8,8,7,10,8,10,10,8,8,7,9,8,10,9,8,10,8,8,7,9,9,9,8,9,8,10,9,7,9,(...TRUNCATED)	[ 0.19074749946594238 ]	[0.00020122528076171875,0.0003070831298828125,0.0003757476806640625,0.0001888275146484375,0.00046157(...TRUNCATED)	[[[-11.0625,-11.0625,-11.125,-10.9375,-10.875,-11.0,-11.4375,1.9453125,2.4375,5.5,2.09375,-9.9375,-1(...TRUNCATED)	[{"boundary_mask":[true,true,false,false,true,false,true,true,false,false,true,false,false,true,true(...TRUNCATED)	null	[ 0.19074749946594238 ]	null	[ 23776186368 ]
"GGCACCTGGAATGGGGTGGCACCTGGGCACTTACCCCGATTTTGGTTAAGGGATCACCTCCGAGCAAGCTCTCTGTCTTCTGATTGGCTTCTTCACTCC(...TRUNCATED)	"GGCACCTGGAATGGGGTGGCACCTGGGCACTTACCCCGATTTTGGTTAAGGGATCACCTCCGAGCAAGCTCTCTGTCTTCTGATTGGCTTCTTCACTCC(...TRUNCATED)	1	8	11,556,804	"GGCACCTGGAATGGGGTGGCACCTGGGCACTTACCCCGATTTTGGTTAAGGGATCACCTCCGAGCAAGCTCTCTGTCTTCTGATTGGCTTCTTCACTCC(...TRUNCATED)	C	G	11,556,804	11,557,316	8	[1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1(...TRUNCATED)	[[9,9,8,7,8,8,10,9,9,7,7,10,9,9,9,9,10,9,9,8,7,8,8,10,9,9,9,8,7,8,10,10,7,8,8,8,8,9,7,10,10,10,10,9,(...TRUNCATED)	[ 0.19634151458740234 ]	[0.000209808349609375,0.00026702880859375,0.0002536773681640625,0.0006256103515625,0.000297546386718(...TRUNCATED)	[[[-10.875,-10.75,-11.0625,-11.0,-10.75,-11.0,-11.125,2.484375,1.7421875,5.5,2.3125,-10.3125,-11.437(...TRUNCATED)	[{"boundary_mask":[true,true,true,false,true,false,false,false,false,true,false,true,false,false,tru(...TRUNCATED)	null	[ 0.19634151458740234 ]	null	[ 23422064640 ]

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