metadata
license: other
tags:
- rna-splicing
- splice-site-prediction
- bioinformatics
oncosplice model weights
Weight files for the splice-site engines used by oncosplice. One sub-folder per model; oncosplice downloads them on first use.
Provenance & licensing of the trained weights
| sub-folder | model | weights © / license |
|---|---|---|
openspliceai/ |
OpenSpliceAI (MANE) | OpenSpliceAI authors — see upstream |
spliceai_pytorch/ |
SpliceAI weights (Keras→PyTorch) | Jaganathan et al. 2019 (Illumina) |
spliceai_keras/ |
SpliceAI original Keras .h5 |
Jaganathan et al. 2019 (Illumina) |
pangolin/ |
Pangolin 40-model ensemble | Zeng & Li 2022 — GPL-3.0 |
spliceformer/ |
Spliceformer 45k base ensemble | Jónsson et al. 2024 — MIT |
These weights are redistributed for non-commercial research use under their
respective original terms. The Pangolin weights are GPL-3.0 (© Zeng & Li 2022);
the oncosplice architecture code that runs them is an independent MIT
re-implementation. The Spliceformer base ensemble (transformer_encoder_45k_171022_*)
is the general-purpose model — the blood-finetuned variants are intentionally
not included.